CpG-methylation-based risk score predicts progression in colorectal cancer

Epigenomics. 2020 Apr;12(7):605-615. doi: 10.2217/epi-2019-0300. Epub 2020 Mar 17.

Abstract

Aim: To identify patients with colorectal cancer (CRC) who are at a truly higher risk of progression, which is key for individualized approaches to precision therapy. Materials & methods: We developed a predictor associated with progression-free interval (PFI) using The Cancer Genome Atlas CRC methylation data. Results: The risk score was associated with PFI in the whole cohort (p < 0.001). A nomogram consisting of the risk score and other significant clinical features was generated to predict the 3- and 5-year PFI in the whole set (area under the curve: 0.79 and 0.71, respectively). Conclusion: The risk score based on 23 DNA-methylation sites may serve as the basis for improved prediction of progression in patients with CRC in future clinical practice.

Keywords: CpG sites; biomarkers; colorectal cancer; epigenetics; methylation; prognosis; progression-free interval.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Colorectal Neoplasms / diagnosis*
  • Colorectal Neoplasms / genetics
  • CpG Islands*
  • DNA Methylation*
  • Disease Progression
  • Female
  • Humans
  • Male
  • Middle Aged
  • Models, Theoretical
  • Prognosis
  • Risk Factors