Identification of a mobilizable, multidrug-resistant genomic island in Myroides odoratimimus isolated from Tibetan pasture

Sci Total Environ. 2020 Jun 25:723:137970. doi: 10.1016/j.scitotenv.2020.137970. Epub 2020 Mar 16.

Abstract

Strains of the environmental bacterium Myroides odoratimimus can cause human infections. However, treating M. odoratimimus infections can be difficult because of multidrug resistance in this organism. In this study, we isolated strain M. odoratimimus G13 from pastureland in Tibet, China. The minimum inhibitory concentration analysis suggested that strain G13 has resistance to multiple antibiotics, with an MIC for tetracycline of 168 mg/L. Whole-genome sequencing and bioinformatic analysis revealed that the genome of G13 was rich in virulence factor-encoding genes and antibiotic resistance genes (ARGs). The mobilizable genomic island MGI1313 was also identified and characterized, and six resistance genes related to four types of antibiotics were annotated in MGI1313. Conjugation assays indicated that MGI1313 could be transferred from G13 to Escherichia coli 25DN by horizontal gene transfer, resulting in multidrug-resistant E. coli conjugants. In conclusion, multidrug-resistant M. odoratimimus G13 and the mobility of MGI1313 raise the risk of difficult-to-treat bacterial infections and should be under close surveillance.

Keywords: Antibiotic resistance genes; Conjugation; Horizontal gene transfer; MGI1313; Mobilizable genomic island.

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • China
  • Drug Resistance, Multiple, Bacterial
  • Escherichia coli / drug effects
  • Flavobacteriaceae
  • Flavobacteriaceae Infections / drug therapy*
  • Genomic Islands / drug effects*
  • Humans
  • Tibet

Substances

  • Anti-Bacterial Agents

Supplementary concepts

  • Myroides odoratimimus