Cellular Stress Upregulates Indole Signaling Metabolites in Escherichia coli

Cell Chem Biol. 2020 Jun 18;27(6):698-707.e7. doi: 10.1016/j.chembiol.2020.03.003. Epub 2020 Apr 2.

Abstract

Escherichia coli broadly colonize the intestinal tract of humans and produce a variety of small molecule signals. However, many of these small molecules remain unknown. Here, we describe a family of widely distributed bacterial metabolites termed the "indolokines." In E. coli, the indolokines are upregulated in response to a redox stressor via aspC and tyrB transaminases. Although indolokine 1 represents a previously unreported metabolite, four of the indolokines (2-5) were previously shown to be derived from indole-3-carbonyl nitrile (ICN) in the plant pathogen defense response. We show that the indolokines are produced in a convergent evolutionary manner relative to plants, enhance E. coli persister cell formation, outperform ICN protection in an Arabidopsis thaliana-Pseudomonas syringae infection model, trigger a hallmark plant innate immune response, and activate distinct immunological responses in primary human tissues. Our molecular studies link a family of cellular stress-induced metabolites to defensive responses across bacteria, plants, and humans.

Keywords: E. coli; IL-6; antibiotic tolerance; host-bacteria interactions; indole; innate immunity; persister cell; signaling; stress response.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Arabidopsis / metabolism
  • Escherichia coli / cytology
  • Escherichia coli / metabolism*
  • Feces / microbiology
  • Humans
  • Indoles / chemistry
  • Indoles / metabolism*
  • Mice
  • Mice, Inbred C57BL
  • Molecular Structure
  • Oxidative Stress
  • Signal Transduction
  • Up-Regulation*

Substances

  • Indoles