Gene interaction network approach to elucidate the multidrug resistance mechanisms in the pathogenic bacterial strain Proteus mirabilis

J Cell Physiol. 2021 Jan;236(1):468-479. doi: 10.1002/jcp.29874. Epub 2020 Jun 15.

Abstract

Proteus mirabilis is one among the most frequently identified pathogen in patients with the urinary tract infection. The multidrug resistance exhibited by P. mirabilis renders the treatment ineffective, and new progressive strategies are needed to overcome the antibiotic resistance (AR). We have analyzed the evolutionary relationship of 29 P. mirabilis strains available in the National Center for Biotechnology Information-Genome database. The antimicrobial resistance genes of P. mirabilis along with the enriched pathways and the Gene Ontology terms are analyzed using gene networks to understand the molecular basis of AR. The genes rpoB, tufB, rpsl, fusA, and rpoA could be exploited as potential drug targets as they are involved in regulating the vital functions within the bacterium. The drug targets reported in the present study will aid researchers in developing new strategies to combat multidrug-resistant P. mirabilis.

Keywords: Proteus mirabilis; clustering analysis; functional enrichment analysis; gene ontology; two-component system.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • Drug Resistance, Multiple, Bacterial / genetics*
  • Gene Regulatory Networks / genetics*
  • Humans
  • Phylogeny
  • Proteus mirabilis / genetics*
  • Urinary Tract Infections / diet therapy
  • Urinary Tract Infections / microbiology

Substances

  • Anti-Bacterial Agents