Two Dimensional Oblique Molecular Packing within a Model Peptide Ribbon Aggregate

Chemphyschem. 2020 Jul 17;21(14):1519-1523. doi: 10.1002/cphc.201901126. Epub 2020 Jun 23.

Abstract

A10 K (A=alanine, K=lysine) model peptides self-assemble into ribbon-like β-sheet aggregates. Here, we report an X-ray diffraction investigation on a flow-aligned dispersion of these self-assembly structures. The two-dimensional wide-angle X-ray scattering pattern suggests that peptide pack in a two-dimensional oblique lattice, essentially identical to the crystalline packing of polyalanine, An (for n>4). One side of the oblique unit cell, corresponding to the anti-parallel β-sheet, is oriented along the ribbon's axis. Together with recently published small angle X-ray scattering data of the same system, this work thus yields a detailed description of the self-assembled ribbon aggregates, down to the molecular length scale. Notably, our results highlight the importance of the crystalline peptide packing within its self-assembly aggregates, which is often neglected.

Keywords: X-ray diffraction; aggregation; flow alignment; peptides; structure elucidation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Oligopeptides / chemistry*
  • Protein Conformation, beta-Strand
  • Protein Multimerization
  • Protein Structure, Quaternary
  • X-Ray Diffraction

Substances

  • Oligopeptides