Mitochondrial volume fraction and translation duration impact mitochondrial mRNA localization and protein synthesis

Elife. 2020 Aug 7:9:e57814. doi: 10.7554/eLife.57814.

Abstract

Mitochondria are dynamic organelles that must precisely control their protein composition according to cellular energy demand. Although nuclear-encoded mRNAs can be localized to the mitochondrial surface, the importance of this localization is unclear. As yeast switch to respiratory metabolism, there is an increase in the fraction of the cytoplasm that is mitochondrial. Our data point to this change in mitochondrial volume fraction increasing the localization of certain nuclear-encoded mRNAs to the surface of the mitochondria. We show that mitochondrial mRNA localization is necessary and sufficient to increase protein production to levels required during respiratory growth. Furthermore, we find that ribosome stalling impacts mRNA sensitivity to mitochondrial volume fraction and counterintuitively leads to enhanced protein synthesis by increasing mRNA localization to mitochondria. This points to a mechanism by which cells are able to use translation elongation and the geometric constraints of the cell to fine-tune organelle-specific gene expression through mRNA localization.

Keywords: S. cerevisiae; cell biology; chromosomes; gene expression; mRNA localization; mitochondria; protein synthesis.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Fungal Proteins / biosynthesis*
  • Mitochondrial Proteins / biosynthesis*
  • Mitochondrial Size*
  • Protein Biosynthesis
  • RNA, Fungal / metabolism*
  • RNA, Messenger / metabolism*
  • RNA, Mitochondrial / metabolism*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / physiology*

Substances

  • Fungal Proteins
  • Mitochondrial Proteins
  • RNA, Fungal
  • RNA, Messenger
  • RNA, Mitochondrial
  • mitochondrial messenger RNA

Associated data

  • GEO/GSE74454
  • GEO/GSE61011