Insights into Protein Stability in Cell Lysate by 19 F NMR Spectroscopy

Chembiochem. 2020 Dec 11;21(24):3575-3579. doi: 10.1002/cbic.202000413. Epub 2020 Sep 16.

Abstract

In living organisms, protein folding and function take place in an inhomogeneous, highly crowded environment possessing a concentration of diverse macromolecules of up to 400 g/L. It has been shown that the intracellular environment has a pronounced effect on the stability, dynamics and function of the protein under study, and has for this reason to be considered. However, most protein studies neglect the presence of these macromolecules. Consequently, we probe here the overall thermodynamic stability of cold shock protein B from Bacillus subtilis (BsCspB) in cell lysate. We found that an increase in cell lysate concentration causes a monotonic increase in the thermodynamic stability of BsCspB. This result strongly underlines the importance of considering the biological environment when inherent protein parameters are quantitatively determined. Moreover, we demonstrate that targeted application of 19 F NMR spectroscopy operates as an ideal tool for protein studies performed in complex cellular surroundings.

Keywords: NMR spectroscopy; biophysics; protein folding.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacillus subtilis / chemistry*
  • Bacillus subtilis / cytology
  • Bacillus subtilis / metabolism
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism
  • Fluorine
  • Nuclear Magnetic Resonance, Biomolecular*
  • Protein Folding
  • Protein Stability
  • Thermodynamics

Substances

  • Bacterial Proteins
  • cold-shock protein CspB, Bacteria
  • Fluorine