Applications of CRISPR in a Microbial Cell Factory: From Genome Reconstruction to Metabolic Network Reprogramming

ACS Synth Biol. 2020 Sep 18;9(9):2228-2238. doi: 10.1021/acssynbio.0c00349. Epub 2020 Aug 31.

Abstract

The well-designed microbial cell factory finds wide applications in chemical, pharmaceutical, and food industries due to its sustainable and environmentally friendly features. Recently, the clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated proteins (CRISPR-Cas) systems have been developed into powerful tools to perform genome editing and transcriptional regulation in prokaryotic and eukaryotic cells. Accordingly, these tools are useful to build microbial cell factories not only by reconstructing the genome but also by reprogramming the metabolic network. In this review, we summarize the recent significant headway and potential uses of the CRISPR technology in the construction of efficient microbial cell factories. Moreover, the future perspectives on the improvement and upgradation of CRISPR-based tools are also discussed.

Keywords: CRISPR; genome editing; metabolic engineering; microbial cell factory; synthetic biology; transcriptional regulation.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Clustered Regularly Interspaced Short Palindromic Repeats / genetics*
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Gene Editing
  • Genome*
  • Metabolic Engineering / methods*
  • Metabolic Networks and Pathways / genetics*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / metabolism