CRISPR and transposon in vivo screens for cancer drivers and therapeutic targets

Genome Biol. 2020 Aug 19;21(1):204. doi: 10.1186/s13059-020-02118-9.

Abstract

Human cancers harbor substantial genetic, epigenetic, and transcriptional changes, only some of which drive oncogenesis at certain times during cancer evolution. Identifying the cancer-driver alterations amongst the vast swathes of "passenger" changes still remains a major challenge. Transposon and CRISPR screens in vivo provide complementary methods for achieving this, and each platform has its own advantages. Here, we review recent major technological breakthroughs made with these two approaches and highlight future directions. We discuss how each genetic screening platform can provide unique insight into cancer evolution, including intra-tumoral heterogeneity, metastasis, and immune evasion, presenting transformative opportunities for targeted therapeutic intervention.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • CRISPR-Cas Systems*
  • Carcinogenesis / genetics
  • Cell Transformation, Neoplastic / genetics
  • Clustered Regularly Interspaced Short Palindromic Repeats*
  • DNA Transposable Elements
  • Genes, Neoplasm*
  • Genetic Testing
  • Humans
  • Immunotherapy
  • Mutagenesis
  • Neoplasm Metastasis
  • Neoplasms / genetics*

Substances

  • DNA Transposable Elements