Synthesis of stable-isotope-labeled N-(3-dimethylaminopropyl)-N'-ethylcarbodiimide and N-(3-dimethylaminopropyl)-N'-ethylurea

J Labelled Comp Radiopharm. 2020 Nov;63(13):526-530. doi: 10.1002/jlcr.3877. Epub 2020 Sep 7.

Abstract

N-(3-Dimethylaminopropyl)-N'-ethylcarbodiimide (EDC) is a carbodiimide coupling reagent commonly used for the preparation of amides from carboxylic acids and amines. Because of initial concerns regarding the genotoxicity of EDC and its use in GMP syntheses at Bristol Myers Squibb, the quantitation of residual EDC and its by-product N-(3-dimethylaminopropyl)-N'-ethylurea (EDU) by liquid chromatography-mass spectrometry (LCMS) impurity analysis was required. These analyses required the use of stable-isotope-labeled EDC and EDU to serve as internal standards. To meet this need, stable-isotope-labeled EDC 9 and EDU 10 were prepared from [1,2-13 C2 ] ethylene glycol and [13 C,15 N] potassium cyanide in overall yields of 6% and 8%, respectively.

Keywords: EDC; EDU; labeling; stable isotope.

MeSH terms

  • Carbodiimides / chemistry
  • Carbon Isotopes / chemistry
  • Chemistry Techniques, Synthetic
  • Ethyldimethylaminopropyl Carbodiimide / chemistry
  • Isotope Labeling*
  • Urea / analogs & derivatives
  • Urea / chemical synthesis
  • Urea / chemistry

Substances

  • Urea
  • Ethyldimethylaminopropyl Carbodiimide
  • Carbon Isotopes
  • Carbodiimides