Chemical Genetics Approach Identifies Abnormal Inflorescence Meristem 1 as a Putative Target of a Novel Sulfonamide That Protects Catalase2-Deficient Arabidopsis against Photorespiratory Stress

Cells. 2020 Sep 2;9(9):2026. doi: 10.3390/cells9092026.

Abstract

Alterations of hydrogen peroxide (H2O2) levels have a profound impact on numerous signaling cascades orchestrating plant growth, development, and stress signaling, including programmed cell death. To expand the repertoire of known molecular mechanisms implicated in H2O2 signaling, we performed a forward chemical screen to identify small molecules that could alleviate the photorespiratory-induced cell death phenotype of Arabidopsisthaliana mutants lacking H2O2-scavenging capacity by peroxisomal catalase2. Here, we report the characterization of pakerine, an m-sulfamoyl benzamide from the sulfonamide family. Pakerine alleviates the cell death phenotype of cat2 mutants exposed to photorespiration-promoting conditions and delays dark-induced senescence in wild-type Arabidopsis leaves. By using a combination of transcriptomics, metabolomics, and affinity purification, we identified abnormal inflorescence meristem 1 (AIM1) as a putative protein target of pakerine. AIM1 is a 3-hydroxyacyl-CoA dehydrogenase involved in fatty acid β-oxidation that contributes to jasmonic acid (JA) and salicylic acid (SA) biosynthesis. Whereas intact JA biosynthesis was not required for pakerine bioactivity, our results point toward a role for β-oxidation-dependent SA production in the execution of H2O2-mediated cell death.

Keywords: H2O2 signaling; abnormal inflorescence meristem 1; catalase2-deficient Arabidopsis; chemical genetics; photorespiration.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / cytology
  • Arabidopsis / drug effects
  • Arabidopsis / genetics*
  • Arabidopsis / metabolism
  • Arabidopsis Proteins / genetics*
  • Arabidopsis Proteins / metabolism
  • Cell Death / drug effects
  • Cell Respiration / drug effects
  • Cell Respiration / genetics
  • Computational Biology / methods
  • Cyclopentanes / metabolism
  • Gene Expression Profiling
  • Gene Expression Regulation, Plant*
  • Hydrogen Peroxide / antagonists & inhibitors
  • Hydrogen Peroxide / pharmacology
  • Hydroponics / methods
  • Meristem / cytology
  • Meristem / drug effects
  • Meristem / metabolism
  • Multienzyme Complexes / genetics*
  • Multienzyme Complexes / metabolism
  • Oxylipins / metabolism
  • Photosynthesis / drug effects
  • Photosynthesis / genetics
  • Plant Cells / drug effects
  • Plant Cells / metabolism
  • Plant Leaves / cytology
  • Plant Leaves / drug effects
  • Plant Leaves / metabolism
  • Salicylic Acid / metabolism
  • Seeds / drug effects
  • Signal Transduction
  • Stress, Physiological
  • Sulfonamides / chemical synthesis
  • Sulfonamides / pharmacology*
  • Transcriptome

Substances

  • AIM1 protein, Arabidopsis
  • Arabidopsis Proteins
  • Cyclopentanes
  • Multienzyme Complexes
  • Oxylipins
  • Sulfonamides
  • jasmonic acid
  • Hydrogen Peroxide
  • CAT2 protein, Arabidopsis
  • Salicylic Acid