A novel DNA primase-helicase pair encoded by SCC mec elements

Elife. 2020 Sep 18:9:e55478. doi: 10.7554/eLife.55478.

Abstract

Mobile genetic elements (MGEs) are a rich source of new enzymes, and conversely, understanding the activities of MGE-encoded proteins can elucidate MGE function. Here, we biochemically characterize three proteins encoded by a conserved operon carried by the Staphylococcal Cassette Chromosome (SCCmec), an MGE that confers methicillin resistance to Staphylococcus aureus, creating MRSA strains. The first of these proteins, CCPol, is an active A-family DNA polymerase. The middle protein, MP, binds tightly to CCPol and confers upon it the ability to synthesize DNA primers de novo. The CCPol-MP complex is therefore a unique primase-polymerase enzyme unrelated to either known primase family. The third protein, Cch2, is a 3'-to-5' helicase. Cch2 additionally binds specifically to a dsDNA sequence downstream of its gene that is also a preferred initiation site for priming by CCPol-MP. Taken together, our results suggest that this is a functional replication module for SCCmec.

Keywords: A-family polymerase; SCCmec; Staphylococcus aureus; biochemistry; chemical biology; helicase; mobile genetic elements; primase.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism
  • DNA Helicases / chemistry
  • DNA Helicases / genetics*
  • DNA Helicases / metabolism
  • DNA Primase / chemistry
  • DNA Primase / genetics*
  • DNA Primase / metabolism
  • Methicillin Resistance / genetics*
  • Sequence Alignment
  • Staphylococcus aureus / enzymology
  • Staphylococcus aureus / genetics*

Substances

  • Bacterial Proteins
  • DNA Primase
  • DNA Helicases