CDK-mediated Yku80 Phosphorylation Regulates the Balance Between Non-homologous End Joining (NHEJ) and Homologous Directed Recombination (HDR)

J Mol Biol. 2020 Dec 4;432(24):166715. doi: 10.1016/j.jmb.2020.11.014. Epub 2020 Nov 17.

Abstract

There are two major pathways for repairing DNA double-strand breaks (DSBs): homologous directed recombination (HDR) and non-homologous end-joining (NHEJ). While NHEJ functions throughout the cell cycle, HDR is only possible during S/G2 phases, suggesting that there are cell cycle-specific mechanisms regulating the balance between the two repair systems. The regulation exerted by CDKs on HDR has been extensively demonstrated, and here we present evidence that the CDK Pho85, in association with the G1 cyclin Pcl1, phosphorylates Yku80 on Ser 623 to regulate NHEJ activity. Cells bearing a non-phosphorylatable version of Yku80 show increased NHEJ and reduced HDR activity. Accordingly, yku80S623A cells present diminished viability upon treatment with the DSB-producer bleomycin, specifically in the G2 phase of the cell cycle. Interestingly, the mutation of the equivalent residue in human Ku80 increases sensitivity to bleomycin in several cancer cell lines, suggesting that this mechanism is conserved in humans. Altogether, our results reveal a new mechanism whereby G1-CDKs mediate the choice between HDR and NHEJ repair pathways, putting the error prone NHEJ on a leash and enabling error free HDR in G2 when homologous sequences are available.

Keywords: DNA repair; HDR; Ku80; NHEJ; Pho85.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Cycle / genetics
  • Cyclin-Dependent Kinases / genetics
  • DNA End-Joining Repair / genetics*
  • DNA-Binding Proteins / genetics*
  • G2 Phase / genetics
  • Humans
  • Ku Autoantigen / genetics*
  • MCF-7 Cells
  • Phosphorylation / genetics
  • Recombinational DNA Repair / genetics*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae Proteins / genetics*

Substances

  • DNA-Binding Proteins
  • Saccharomyces cerevisiae Proteins
  • YKU80 protein, S cerevisiae
  • Cyclin-Dependent Kinases
  • XRCC5 protein, human
  • Ku Autoantigen