The hypothetical periplasmic protein PA1624 from Pseudomonas aeruginosa folds into a unique two-domain structure

Acta Crystallogr F Struct Biol Commun. 2020 Dec 1;76(Pt 12):609-615. doi: 10.1107/S2053230X20014612. Epub 2020 Nov 30.

Abstract

The crystal structure of the 268-residue periplasmic protein PA1624 from the opportunistic pathogen Pseudomonas aeruginosa PAO1 was determined to high resolution using the Se-SAD method for initial phasing. The protein was found to be monomeric and the structure consists of two domains, domains 1 and 2, comprising residues 24-184 and 185-268, respectively. The fold of these domains could not be predicted even using state-of-the-art prediction methods, and similarity searches revealed only a very distant homology to known structures, namely to Mog1p/PsbP-like and OmpA-like proteins for the N- and C-terminal domains, respectively. Since PA1624 is only present in an important human pathogen, its unique structure and periplasmic location render it a potential drug target. Consequently, the results presented here may open new avenues for the discovery and design of antibacterial drugs.

Keywords: Pseudomonas aeruginosa; human pathogenic bacteria; periplasmic proteins; potential drug targets; unique folds; unknown function.

MeSH terms

  • Crystallography, X-Ray
  • Models, Molecular
  • Periplasmic Proteins / chemistry*
  • Periplasmic Proteins / genetics
  • Periplasmic Proteins / metabolism
  • Protein Domains
  • Protein Folding
  • Pseudomonas aeruginosa / chemistry*

Substances

  • Periplasmic Proteins