Genetic Factors in Antiphospholipid Syndrome: Preliminary Experience with Whole Exome Sequencing

Int J Mol Sci. 2020 Dec 15;21(24):9551. doi: 10.3390/ijms21249551.

Abstract

As in many autoimmune diseases, the pathogenesis of the antiphospholipid syndrome (APS) is the result of a complex interplay between predisposing genes and triggering environmental factors, leading to a loss of self-tolerance and immune-mediated tissue damage. While the first genetic studies in APS focused primarily on the human leukocytes antigen system (HLA) region, more recent data highlighted the role of other genes in APS susceptibility, including those involved in the immune response and in the hemostatic process. In order to join this intriguing debate, we analyzed the single-nucleotide polymorphisms (SNPs) derived from the whole exome sequencing (WES) of two siblings affected by APS and compared our findings with the available literature. We identified genes encoding proteins involved in the hemostatic process, the immune response, and the phospholipid metabolism (PLA2G6, HSPG2, BCL3, ZFAT, ATP2B2, CRTC3, and ADCY3) of potential interest when debating the pathogenesis of the syndrome. The study of the selected SNPs in a larger cohort of APS patients and the integration of WES results with the network-based approaches will help decipher the genetic risk factors involved in the diverse clinical features of APS.

Keywords: antiphospholipid antibodies; antiphospholipid syndrome; autoantibodies; autoimmune diseases; immunogenetics; network-based approach; thrombosis; whole exome sequencing.

Publication types

  • Case Reports
  • Review

MeSH terms

  • Alleles
  • Antibodies, Antiphospholipid / genetics
  • Antibodies, Antiphospholipid / immunology
  • Antiphospholipid Syndrome / complications
  • Antiphospholipid Syndrome / diagnosis
  • Antiphospholipid Syndrome / genetics*
  • Antiphospholipid Syndrome / metabolism*
  • Computational Biology / methods
  • Exome Sequencing
  • Female
  • Gene Expression Profiling
  • Genetic Predisposition to Disease*
  • Genome-Wide Association Study*
  • Humans
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide
  • Thrombosis / etiology

Substances

  • Antibodies, Antiphospholipid