Biochemical Timekeeping Via Reentrant Phase Transitions

J Mol Biol. 2021 Jun 11;433(12):166794. doi: 10.1016/j.jmb.2020.166794. Epub 2020 Dec 31.

Abstract

Appreciation for the role of liquid-liquid phase separation in the functional organization of cellular matter has exploded in recent years. More recently there has been a growing effort to understand the principles of heterotypic phase separation, the demixing of multiple proteins and nucleic acids into a single functional condensate. A phase transition is termed reentrant if it involves the transformation of a system from one state into a macroscopically similar or identical state via at least two phase transitions elicited by variation of a single parameter. Reentrant liquid-liquid phase separation can occur when the condensation of one species is tuned by another. Reentrant phase transitions have been modeled in vitro using protein and RNA mixtures. These biochemical studies reveal two features of reentrant phase separation that are likely important to functional cellular condensates: (1) the ability to generate condensates with layered functional topologies, and (2) the ability to generate condensates whose composition and duration are self-limiting to enable a form of biochemical timekeeping. We relate these biochemical studies to potential cellular examples and discuss how layered topologies and self-regulation may impact key biological processes.

Keywords: RNA; condensates; disordered proteins; phase separation; reentrant phase transitions; transcription.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Gene Expression Regulation
  • Liquid-Liquid Extraction
  • Macromolecular Substances / chemistry
  • Phase Transition
  • Proteins / chemistry*
  • RNA / chemistry*
  • Transcription, Genetic

Substances

  • Macromolecular Substances
  • Proteins
  • RNA