Reducing False Positives through the Application of Fluorescence Lifetime Technology: A Comparative Study Using TYK2 Kinase as a Model System

SLAS Discov. 2021 Jun;26(5):663-675. doi: 10.1177/24725552211002472. Epub 2021 Mar 30.

Abstract

The predominant assay detection methodologies used for enzyme inhibitor identification during early-stage drug discovery are fluorescence-based. Each fluorophore has a characteristic fluorescence decay, known as the fluorescence lifetime, that occurs throughout a nanosecond-to-millisecond timescale. The measurement of fluorescence lifetime as a reporter for biological activity is less common than fluorescence intensity, even though the latter has numerous issues that can lead to false-positive readouts. The confirmation of hit compounds as true inhibitors requires additional assays, cost, and time to progress from hit identification to lead drug-candidate optimization. To explore whether the use of fluorescence lifetime technology (FLT) can offer comparable benefits to label-free-based approaches such as RapidFire mass spectroscopy (RF-MS) and a superior readout compared to time-resolved fluorescence resonance energy transfer (TR-FRET), three equivalent assays were developed against the clinically validated tyrosine kinase 2 (TYK2) and screened against annotated compound sets. FLT provided a marked decrease in the number of false-positive hits when compared to TR-FRET. Further cellular screening confirmed that a number of potential inhibitors directly interacted with TYK2 and inhibited the downstream phosphorylation of the signal transducer and activator of transcription 4 protein (STAT4).

Keywords: RapidFire mass spectrometry (RF-MS); fluorescence lifetime technology (FLT); high-throughput screening (HTS); small-molecule screening; time-resolved fluorescence resonance energy transfer (TR-FRET).

MeSH terms

  • Drug Discovery / methods*
  • Drug Discovery / standards*
  • Drug Evaluation, Preclinical / methods*
  • Drug Evaluation, Preclinical / standards*
  • Fluorescence Resonance Energy Transfer
  • Fluorescent Dyes*
  • High-Throughput Screening Assays
  • Mass Spectrometry
  • Reproducibility of Results
  • Sensitivity and Specificity
  • TYK2 Kinase / antagonists & inhibitors*
  • TYK2 Kinase / chemistry*

Substances

  • Fluorescent Dyes
  • TYK2 Kinase