The effect of single biome occupancy on the estimation of biome shifts and the detection of biome conservatism

PLoS One. 2021 Mar 30;16(3):e0248839. doi: 10.1371/journal.pone.0248839. eCollection 2021.

Abstract

Biome conservatism is often regarded as common in diversifying lineages, based on the detection of low biome shift rates or high phylogenetic signal. However, many studies testing biome conservatism utilise a single-biome-per-species approach, which may influence the detection of biome conservatism. Meta-analyses show that biome shift rates are significantly lower (less than a tenth), when single biome occupancy approaches are adopted. Using New Zealand plant lineages, estimated biome shifts were also significantly lower (14-67% fewer biome shifts) when analysed under the assumption of a single biome per species. Although a single biome approach consistently resulted in lower biome shifts, it detected fewer instances of biome conservatism. A third of clades (3 out of 9) changed status in biome conservatism tests between single and multiple biome occupancy approaches, with more instances of significant biome conservatism when using a multiple biome occupancy approach. A single biome approach may change the likelihood of finding biome conservatism because it assumes biome specialisation within species, falsely recognises some biome shift types and fails to include other biome shift types. Our results indicate that the degree of biome fidelity assumed has a strong influence on analyses assessing biome shift rates, and biome conservatism testing. We advocate analyses that allow species to occupy multiple biomes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Conservation of Natural Resources*
  • Ecosystem*
  • New Zealand
  • Phylogeny
  • Species Specificity

Grants and funding

This work was supported by a University of Otago for a Doctoral Scholarship and Doctoral Postgraduate Publishing Bursary to EED and The Royal Society of New Zealand (www.royalsociety.org.nz) Marsden Fund grants to WGL (LCR1702) and MJL (UOO14411). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.