A deep learning classifier for digital breast tomosynthesis

Phys Med. 2021 Mar:83:184-193. doi: 10.1016/j.ejmp.2021.03.021. Epub 2021 Mar 31.

Abstract

Purpose: To develop a computerized detection system for the automatic classification of the presence/absence of mass lesions in digital breast tomosynthesis (DBT) annotated exams, based on a deep convolutional neural network (DCNN).

Materials and methods: Three DCNN architectures working at image-level (DBT slice) were compared: two state-of-the-art pre-trained DCNN architectures (AlexNet and VGG19) customized through transfer learning, and one developed from scratch (DBT-DCNN). To evaluate these DCNN-based architectures we analysed their classification performance on two different datasets provided by two hospital radiology departments.DBT slice images were processed following normalization, background correction and data augmentation procedures. The accuracy, sensitivity, and area-under-the-curve (AUC) values were evaluated on both datasets, using receiver operating characteristic curves. A Grad-CAM technique was also implemented providing anindication of the lesion position in the DBT slice.

Results: Accuracy, sensitivity and AUC for the investigated DCNN are in-line with the best performance reported in the field. The DBT-DCNN network developed in this work showed an accuracy and a sensitivity of (90% ± 4%) and (96% ± 3%), respectively, with an AUC as good as 0.89 ± 0.04. Ak-fold cross validation test (withk = 4) showed an accuracy of 94.0% ± 0.2%, and a F1-score test provided a value as good as 0.93 ± 0.03. Grad-CAM maps show high activation in correspondence of pixels within the tumour regions.

Conclusions: We developed a deep learning-based framework (DBT-DCNN) to classify DBT images from clinical exams. We investigated also apossible application of the Grad-CAM technique to identify the lesion position.

Keywords: Breast Tumor; Computed Aided Diagnosis; Convolution neural network; Deep Learning; Digital Breast Tomosynthesis; Machine Learning.

MeSH terms

  • Area Under Curve
  • Breast Neoplasms* / diagnostic imaging
  • Deep Learning*
  • Female
  • Humans
  • Mammography
  • Neural Networks, Computer
  • ROC Curve