Transport-coupled ubiquitination of the borate transporter BOR1 for its boron-dependent degradation

Plant Cell. 2021 Apr 17;33(2):420-438. doi: 10.1093/plcell/koaa020.

Abstract

Plants take up and translocate nutrients through transporters. In Arabidopsis thaliana, the borate exporter BOR1 acts as a key transporter under boron (B) limitation in the soil. Upon sufficient-B supply, BOR1 undergoes ubiquitination and is transported to the vacuole for degradation, to avoid overaccumulation of B. However, the mechanisms underlying B-sensing and ubiquitination of BOR1 are unknown. In this study, we confirmed the lysine-590 residue in the C-terminal cytosolic region of BOR1 as the direct ubiquitination site and showed that BOR1 undergoes K63-linked polyubiquitination. A forward genetic screen identified that amino acid residues located in vicinity of the substrate-binding pocket of BOR1 are essential for the vacuolar sorting. BOR1 variants that lack B-transport activity showed a significant reduction of polyubiquitination and subsequent vacuolar sorting. Coexpression of wild-type (WT) and a transport-defective variant of BOR1 in the same cells showed degradation of the WT but not the variant upon sufficient-B supply. These findings suggest that polyubiquitination of BOR1 relies on its conformational transition during the transport cycle. We propose a model in which BOR1, as a B transceptor, directly senses the B concentration and promotes its own polyubiquitination and vacuolar sorting for quick and precise maintenance of B homeostasis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Amino Acid Substitution
  • Antiporters / chemistry
  • Antiporters / metabolism*
  • Arabidopsis Proteins / chemistry
  • Arabidopsis Proteins / metabolism*
  • Binding Sites
  • Boron / pharmacology*
  • Genetic Testing
  • Green Fluorescent Proteins / metabolism
  • Lysine / metabolism
  • Models, Biological
  • Polyubiquitin / metabolism
  • Protein Transport / drug effects
  • Proteolysis / drug effects*
  • Protons
  • Saccharomyces cerevisiae / drug effects
  • Saccharomyces cerevisiae / metabolism
  • Substrate Specificity
  • Ubiquitination* / drug effects
  • Vacuoles / metabolism

Substances

  • Antiporters
  • Arabidopsis Proteins
  • BOR1 protein, Arabidopsis
  • Protons
  • Polyubiquitin
  • Green Fluorescent Proteins
  • Lysine
  • Boron