Roles of tetraspanins during trophoblast development: bioinformatics and new perspectives

Cell Tissue Res. 2021 Oct;386(1):157-171. doi: 10.1007/s00441-021-03502-y. Epub 2021 Jul 19.

Abstract

Tetraspanins are a superfamily of membrane proteins found in all eukaryotic organisms. They act as scaffold molecules that regulate the traffic and function of other membrane/signaling proteins, resulting in important downstream cellular consequences. The aim of this work was to use transcriptomes and bioinformatics analysis to identify the tetraspanins (and their partners) involved in trophoblast differentiation. We built a protein-protein interaction network around tetraspanins which revealed that tetraspanins CD9, CD81, and CD82 show a specific expression during trophoblast differentiation. These proteins appeared to be interconnected and to recruit several membrane partners which include integrins, immune-related molecules, and a variety of receptors. During weeks 8 to 24, a CD9 expression trajectory was identified in extravillous trophoblasts, and a website was developed: ( https://extravillous.shinyapps.io/CD9humanEVT/ ). In conclusion, CD81 may, together with CD9 and CD82, be interconnected in controlling trophoblast invasion in the endometrium. CD9 expression trajectory in extravillous trophoblast between weeks 8 and 24 shows the involvement of CD9 in cell adhesion and migration.

Keywords: Protein–protein interaction network; Pseudotime trajectory; Tetraspanins; Transcriptomes; Trophoblast.

MeSH terms

  • Animals
  • Computational Biology / methods*
  • Female
  • Tetraspanins / physiology*
  • Trophoblasts / physiology*

Substances

  • Tetraspanins