Delineating the lipidated Atg8 structure for unveiling its hidden activity in autophagy

Autophagy. 2021 Oct;17(10):3271-3272. doi: 10.1080/15548627.2021.1961075. Epub 2021 Aug 12.

Abstract

Atg8 has attracted attention as a central factor in autophagosome biogenesis for a long time. However, the molecular activities of Atg8 on the phagophore membranes as the physiologically functional lipidated form remain enigmatic. In our recent study, we unveiled the hidden physicochemical activity of lipidated Atg8 toward the membrane. Structural analysis revealed that lipidated Atg8 adopts a preferred orientation on the membrane, contacting the membrane using aromatic residues and at the same time exposing cargo binding pockets to the solvent, enabling this small protein to perturb and transform membranes while recognizing autophagic cargos. The membrane perturbation activity was shown to be essential for efficient autophagosome biogenesis, yet questions on the mechanistic roles of Atg8 remain open.

Keywords: Atg8; GUV; NMR; autophagosome; autophagy; lipidation; membrane perturbation; vacuolar morphology.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Autophagy* / physiology
  • Autophagy-Related Protein 8 Family / metabolism
  • Microtubule-Associated Proteins / metabolism
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins* / metabolism
  • Vacuoles / metabolism

Substances

  • ATG8 protein, S cerevisiae
  • Autophagy-Related Protein 8 Family
  • Microtubule-Associated Proteins
  • Saccharomyces cerevisiae Proteins

Grants and funding

This work was supported in part by JSPS KAKENHI grant nos. 18H03989 and 19H05707 (to N.N.N.); CREST, Japan Science and Technology Agency Grant number JPMJCR13M7 (to N.N.N.); JPMJCR20E3 (to N.N.N.); and grants from the Takeda Science Foundation (to N.N.N.), Mochida Memorial Foundation for Medical and Pharmaceutical Research (to N.N.N.) and the Tokyo Biochemical Research foundation (to N.N.N.).