iBRET Screen of the ABCD1 Peroxisomal Network and Mutation-Induced Network Perturbations

J Proteome Res. 2021 Sep 3;20(9):4366-4380. doi: 10.1021/acs.jproteome.1c00330. Epub 2021 Aug 12.

Abstract

Mapping the network of proteins provides a powerful means to investigate the function of disease genes and to unravel the molecular basis of phenotypes. We present an automated informatics-aided and bioluminescence resonance energy transfer-based approach (iBRET) enabling high-confidence detection of protein-protein interactions in living mammalian cells. A screen of the ABCD1 protein, which is affected in X-linked adrenoleukodystrophy (X-ALD), against an organelle library of peroxisomal proteins demonstrated applicability of iBRET for large-scale experiments. We identified novel protein-protein interactions for ABCD1 (with ALDH3A2, DAO, ECI2, FAR1, PEX10, PEX13, PEX5, PXMP2, and PIPOX), mapped its position within the peroxisomal protein-protein interaction network, and determined that pathogenic missense variants in ABCD1 alter the interaction with selected binding partners. These findings provide mechanistic insights into pathophysiology of X-ALD and may foster the identification of new disease modifiers.

Keywords: ABCD1; BRET; FAR1; X-ALD; bioluminescence resonance energy transfer; fatty acids; interactome; lipid droplets; living cells; protein−protein interaction; screening.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • ATP Binding Cassette Transporter, Subfamily D, Member 1 / genetics
  • ATP-Binding Cassette Transporters* / genetics
  • ATP-Binding Cassette Transporters* / metabolism
  • Animals
  • Energy Transfer
  • Fatty Acids
  • Informatics*
  • Mutation

Substances

  • ATP Binding Cassette Transporter, Subfamily D, Member 1
  • ATP-Binding Cassette Transporters
  • Fatty Acids