The global COVID-19 pandemic starting at 2020 induced by the severe acute respiratory syndrome coronavirus 2 virus (SARS-CoV-2) has revealed a very pressing need for rapid, affordable and effective diagnosis for epidemic management and control. Although several commercialized analytical methods (e.g., reverse transcription polymerase chain reaction and enzyme linked immunosorbent assay) have been developed for detecting SARS-CoV-2, they are expensive and time-consuming. Most recently, low-cost molecularly imprinted polymer (MIP)-based sensors have received attention. In this study, by introducing gold/graphene (Au/Gr) nanohybrids to modify a screen-printed carbon electrode (SPCE) and using arginine as the functional monomer, a simple and highly sensitive MIP sensor was proposed to detect SARS-CoV-2 nucleocapsid protein (ncovNP). By optimizing various influencing factors, the proposed MIP sensor shows wide linear range and low detection limit for ncovNP owing to excellent electrical property and large surface of Au/Gr and specific recognition ability of MIP, revealing important potential application for the effective early diagnosis of COVID-19.