TOP-LD: A tool to explore linkage disequilibrium with TOPMed whole-genome sequence data

Affiliations

• ¹ Curriculum in Bioinformatics and Computational Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
• ² Department of Biostatistics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
• ³ Department of Genome Sciences, University of Washington, Seattle, WA 98105, USA.
• ⁴ Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
• ⁵ Department of Medicine, University of Mississippi Medical Center, Jackson, MS 39216, USA.
• ⁶ Department of Biostatistics, University of Washington, Seattle, WA 98105, USA.
• ⁷ Center for Public Health Genomics, Department of Public Health Sciences, University of Virginia School of Medicine, Charlottesville, VA 22908, USA.
• ⁸ The Institute for Translational Genomics and Population Sciences, Department of Pediatrics, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA 90502, USA.
• ⁹ The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York City, NY 10029, USA; Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen, 2200 Copenhagen, Denmark.
• ¹⁰ The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York City, NY 10029, USA.
• ¹¹ TOPMed Informatics Research Center, University of Michigan, Department of Biostatistics, Ann Arbor, MI 48109, USA.
• ¹² Human Genetics Center, School of Public Health, The University of Texas Health Science Center at Houston, Houston, TX 77030, USA.
• ¹³ Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.
• ¹⁴ Human Genetics Center, Department of Epidemiology, Human Genetics, and Environmental Sciences, School of Public Health, The University of Texas Health Science Center at Houston, Houston, TX 77030, USA.
• ¹⁵ Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
• ¹⁶ Department of Epidemiology, University of Washington, Seattle, WA 98195, USA; Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA.
• ¹⁷ Division of Biostatistics, Institute for Health and Equity, and Cancer Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA. Electronic address: [email protected].
• ¹⁸ Department of Biostatistics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA; Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA; Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA. Electronic address: [email protected].