Molecular and clinical descriptions of patients with GABAA receptor gene variants (GABRA1, GABRB2, GABRB3, GABRG2): A cohort study, review of literature, and genotype-phenotype correlation

Epilepsia. 2022 Oct;63(10):2519-2533. doi: 10.1111/epi.17336. Epub 2022 Aug 13.

Abstract

Objective: γ-Aminobutyric acid (GABA)A -receptor subunit variants have recently been associated with neurodevelopmental disorders and/or epilepsy. The phenotype linked with each gene is becoming better known. Because of the common molecular structure and physiological role of these phenotypes, it seemed interesting to describe a putative phenotype associated with GABAA -receptor-related disorders as a whole and seek possible genotype-phenotype correlations.

Methods: We collected clinical, electrophysiological, therapeutic, and molecular data from patients with GABAA -receptor subunit variants (GABRA1, GABRB2, GABRB3, and GABRG2) through a national French collaboration using the EPIGENE network and compared these data to the one already described in the literature.

Results: We gathered the reported patients in three epileptic phenotypes: 15 patients with fever-related epilepsy (40%), 11 with early developmental epileptic encephalopathy (30%), 10 with generalized epilepsy spectrum (27%), and 1 patient without seizures (3%). We did not find a specific phenotype for any gene, but we showed that the location of variants on the transmembrane (TM) segment was associated with a more severe phenotype, irrespective of the GABAA -receptor subunit gene, whereas N-terminal variants seemed to be related to milder phenotypes.

Significance: GABAA -receptor subunit variants are associated with highly variable phenotypes despite their molecular and physiological proximity. None of the genes described here was associated with a specific phenotype. On the other hand, it appears that the location of the variant on the protein may be a marker of severity. Variant location may have important weight in the development of targeted therapeutics.

Keywords: GABA A receptor; channelopathy; developmental and epileptic encephalopathy; genetic generalized epilepsy.

Publication types

  • Review

MeSH terms

  • Cohort Studies
  • Epilepsy* / genetics
  • Epilepsy, Generalized*
  • Genetic Association Studies
  • Humans
  • Mutation
  • Phenotype
  • Receptors, GABA-A / genetics
  • Receptors, GABA-A / metabolism
  • gamma-Aminobutyric Acid / metabolism

Substances

  • GABRA1 protein, human
  • GABRB2 protein, human
  • GABRB3 protein, human
  • GABRG2 protein, human
  • Receptors, GABA-A
  • gamma-Aminobutyric Acid

Associated data

  • RefSeq/NM_000806.5
  • RefSeq/NM_000816.3
  • RefSeq/NM_000814.4
  • RefSeq/NM_021911.2