Heterogeneity of the Omicron variant in Senegal

New Microbes New Infect. 2022 May 28:47:100990. doi: 10.1016/j.nmni.2022.100990. eCollection 2022 Apr-May.

Abstract

•Omicron variant continues to progress in Senegal with the appearance of new contaminations.•IRESSEF detected the first positive case of the Omicron variant on Friday, December 3, 2021.•Since this date, the number of Omicron variant infections has increased over the weeks.•Molecular surveillance of the Omicron variant allowed us to identify a strong variation of this variant in our country.

Keywords: COVID-19; Omicron variant; SARS-CoV-2; genomics; lineages.