Streptomyces spiramenti sp. nov., isolated from a deep-sea microbial mat

Rachel M Loughran; Caitlin M Diefendorf; Jassmine R Reill-VanSise; Edward A Mitchell; Oliver B Vining; David A Gallegos; Gregory Miller; Marc J Koyack; David K Oline; Orion S Rivers; Blake Ushijima; Jimmy H Saw; Michael O Gaylor; Kerry L McPhail; Patrick Videau

doi:10.1007/s00203-022-03326-6

Streptomyces spiramenti sp. nov., isolated from a deep-sea microbial mat

Arch Microbiol. 2022 Nov 19;204(12):717. doi: 10.1007/s00203-022-03326-6.

Authors

Rachel M Loughran^{1

2}, Caitlin M Diefendorf^{1

3}, Jassmine R Reill-VanSise^{1

4}, Edward A Mitchell⁵, Oliver B Vining^{5

6}, David A Gallegos⁵, Gregory Miller⁷, Marc J Koyack⁸, David K Oline¹, Orion S Rivers⁹, Blake Ushijima¹⁰, Jimmy H Saw¹¹, Michael O Gaylor¹², Kerry L McPhail¹³, Patrick Videau^{14

15}

Affiliations

¹ Department of Biology, Southern Oregon University, Ashland, OR, USA.
² Microbiology Graduate Program, University of Delaware, Newark, DE, USA.
³ School of Medicine, Oregon Health and Science University, Portland, OR, USA.
⁴ Cedars-Sinai Medical Center, Beverley Hills, CA, USA.
⁵ Department of Pharmaceutical Sciences, Oregon State University, Corvallis, OR, USA.
⁶ Apeel Sciences, Goleta, CA, USA.
⁷ Natural Sciences Department, Flagler College, St. Augustine, FL, USA.
⁸ Gwynedd Mercy University, Gwynedd Valley, PA, USA.
⁹ Institute for Imaging and Analytical Technologies, Mississippi State University, Mississippi State, MS, USA.
¹⁰ Department of Biology and Marine Biology, University of North Carolina Wilmington, Wilmington, NC, USA.
¹¹ Department of Biological Sciences, The George Washington University, Washington, DC, USA.
¹² Department of Chemistry, Dakota State University, Madison, SD, USA.
¹³ Department of Pharmaceutical Sciences, Oregon State University, Corvallis, OR, USA. [email protected].
¹⁴ Department of Biology, Southern Oregon University, Ashland, OR, USA. [email protected].
¹⁵ Bayer Environmental Science, Cary, NC, USA. [email protected].

PMID: 36401660
DOI: 10.1007/s00203-022-03326-6

Abstract

Strain 5675061^T was isolated from a deep-sea microbial mat near hydrothermal vents within the Axial Seamount caldera on the Juan de Fuca Ridge (NE Pacific Ocean) and was taxonomically evaluated using a polyphasic approach. Morphological and chemotaxonomic properties are consistent with characteristics of the genus Streptomyces: aerobic Gram-stain-positive filaments that form spores, L,L-diaminopimelic acid in whole-cell hydrolysates, and iso-C_16:0 as the major fatty acid. Phylogenetic analysis, genomic, and biochemical comparisons show close evolutionary relatedness to Streptomyces lonarensis NCL716^T, S. bohaiensis 11A07^T, and S. otsuchiensis OTB305^T but genomic relatedness indices identify strain 5675061^T as a distinct species. Based on a polyphasic characterization, identifying differences in genomic and taxonomic data, strain 5675061^T represents a novel species, for which the name Streptomyces spiramenti sp. nov. is proposed. The type strain is 5675061^T (=LMG 31896^T = DSM 111793^T).

Keywords: Deep-sea; Hydrothermal vent; Marine; Streptomyces.

MeSH terms

Base Composition
DNA, Bacterial / genetics
Phylogeny
RNA, Ribosomal, 16S / genetics
Streptomyces*

Substances

RNA, Ribosomal, 16S
DNA, Bacterial

Abstract

MeSH terms

Substances

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