Discovery of N-Phenylpropiolamide as a Novel Succinate Dehydrogenase Inhibitor Scaffold with Broad-Spectrum Antifungal Activity on Phytopathogenic Fungi

J Agric Food Chem. 2023 Mar 1;71(8):3681-3693. doi: 10.1021/acs.jafc.2c07712. Epub 2023 Feb 15.

Abstract

Based on the structural features of both succinate dehydrogenase inhibitors (SDHIs) and targeted covalent inhibitors, a series of N-phenylpropiolamides containing a Michael acceptor moiety were designed to find new antifungal compounds. Nineteen compounds showed potent inhibition activity in vitro on nine species of plant pathogenic fungi. Compounds 9 and 13 showed higher activity on most of the fungi than the standard drug azoxystrobin. Compound 13 could completely inhibit Physalospora piricola infection on apples at 200 μg/mL concentration over 7 days and showed high safety to seed germination and seedling growth of plants at ≤100 μg/mL concentration. The action mechanism showed that 13 is an SDH inhibitor with a median inhibitory concentration, IC50, value of 0.55 μg/mL, comparable with that of the positive drug boscalid. Molecular docking studies revealed that 13 can bind well to the ubiquinone-binding region of SDH by hydrogen bonds and undergoes π-alkyl interaction and π-cation interaction. At the cellular level, 1 as the parent compound could destruct the mycelial structure of P. piricola and partly dissolve the cell wall and/or membrane. Structure-activity relationship analysis showed that the acetenyl group should be a structure determinant for the activity, and the substitution pattern of the phenyl ring can significantly impact the activity. Thus, N-phenylpropiolamide emerged as a novel and promising lead scaffold for the development of new SDHIs for plant protection.

Keywords: antifungal activity; fungicide; phytopathogenic fungi; propiolamide; succinate dehydrogenase inhibitor.

MeSH terms

  • Antifungal Agents / chemistry
  • Antifungal Agents / pharmacology
  • Fungi / metabolism
  • Fungicides, Industrial* / chemistry
  • Fungicides, Industrial* / pharmacology
  • Molecular Docking Simulation
  • Structure-Activity Relationship
  • Succinate Dehydrogenase
  • Succinates
  • Succinic Acid
  • Xylariales* / metabolism

Substances

  • Antifungal Agents
  • Succinic Acid
  • Succinate Dehydrogenase
  • Succinates
  • Fungicides, Industrial