Objective: To determine whether the adenine base editor (ABE7.10) can be used to fix harmful mutations in the human G6PC3 gene. Methods: To investigate the safety of base-edited embryos, off-target analysis by deep sequencing was used to examine the feasibility and editing efficiency of various sgRNA expression vectors. The human HEK293T mutation models and human embryos were also used to test the feasibility and editing efficiency of correction. Results: ①The G6PC3(C295T) mutant cell model was successfully created. ②In the G6PC3(C295T) mutant cell model, three distinct Re-sgRNAs were created and corrected, with base correction efficiency ranging from 8.79% to 19.56% . ③ ABE7.10 could successfully fix mutant bases in the human pathogenic embryo test; however, base editing events had also happened in other locations. ④ With the exception of one noncoding site, which had a high safety rate, deep sequencing analysis revealed that the detection of 32 probable off-target sites was <0.5% . Conclusion: This study proposes a new base correction strategy based on human pathogenic embryos; however, it also produces a certain nontarget site editing, which needs to be further analyzed on the PAM site or editor window.
目的: 研究腺嘌呤单碱基编辑器(ABE7.10)对人G6PC3基因致病性突变纠正的可行性。 方法: 构建不同sgRNA的表达载体,分别在人HEK293T突变模型和人类胚胎中尝试纠正的可行性和编辑效率,通过深度测序进行脱靶分析。 结果: ①成功构建了G6PC3(C295T)的突变细胞模型。②构建了三个不同的Re-sgRNA,并在G6PC3(C295T)突变细胞模型中实现了纠正,碱基纠正效率为8.79%~19.56%。③人致病胚胎实验证明ABE7.10能有效纠正突变碱基,但同时在其他位置也发生了碱基编辑事件。④深度测序分析显示,对32个潜在脱靶位点检测,除1个非编码区位点转换效率为1.03%外,其余均低于0.5%,具有较高的安全性。 结论: 该研究提出了一种新的基于人类致病胚胎的碱基纠正策略,但也产生了一定的非目标位点编辑,后续还需在PAM位点或者编辑器的窗口上进行进一步研究。.
Keywords: Base editing; Embryo correction; Gene, G6PC3; Severe congenital neutropenia.