Gating of β-Barrel Protein Pores, Porins, and Channels: An Old Problem with New Facets

Int J Mol Sci. 2023 Jul 28;24(15):12095. doi: 10.3390/ijms241512095.

Abstract

β barrels are ubiquitous proteins in the outer membranes of mitochondria, chloroplasts, and Gram-negative bacteria. These transmembrane proteins (TMPs) execute a wide variety of tasks. For example, they can serve as transporters, receptors, membrane-bound enzymes, as well as adhesion, structural, and signaling elements. In addition, multimeric β barrels are common structural scaffolds among many pore-forming toxins. Significant progress has been made in understanding the functional, structural, biochemical, and biophysical features of these robust and versatile proteins. One frequently encountered fundamental trait of all β barrels is their voltage-dependent gating. This process consists of reversible or permanent conformational transitions between a large-conductance, highly permeable open state and a low-conductance, solute-restrictive closed state. Several intrinsic molecular mechanisms and environmental factors modulate this universal property of β barrels. This review article outlines the typical signatures of voltage-dependent gating. Moreover, we discuss recent developments leading to a better qualitative understanding of the closure dynamics of these TMPs.

Keywords: conformational transitions; electrophysiology; membrane proteins; protein folding; single-molecule dynamics.

Publication types

  • Review

MeSH terms

  • Bacterial Outer Membrane Proteins / metabolism
  • Biophysics
  • Membrane Transport Proteins* / metabolism
  • Molecular Conformation
  • Porins* / metabolism

Substances

  • Porins
  • Membrane Transport Proteins
  • Bacterial Outer Membrane Proteins