Automatic MRI-based rotator cuff muscle segmentation using U-Nets

Background: The rotator cuff (RC) is a crucial anatomical element within the shoulder joint, facilitating an extensive array of motions while maintaining joint stability. Comprised of the subscapularis, infraspinatus, supraspinatus, and teres minor muscles, the RC plays an integral role in shoulder functionality. RC injuries represent prevalent, incapacitating conditions that impose a substantial impact on approximately 8% of the adult population in the USA. Segmentation of these muscles provides valuable anatomical information for evaluating muscle quality and allows for better treatment planning.

Materials and methods: We developed a model based on residual deep convolutional encoder-decoder U-net to segment RC muscles on oblique sagittal T1-weighted images MRI. Our data consisted of shoulder MRIs from a cohort of 157 individuals, consisting of individuals without RC tendon tear (N=79) and patients with partial RC tendon tear (N=78). We evaluated different modeling approaches. The performance of the models was evaluated by calculating the Dice coefficient on the hold out test set.

Results: The best-performing model's median Dice coefficient was measured to be 89% (Q1:85%, Q3:96%) for the supraspinatus, 86% (Q1:82%, Q3:88%) for the subscapularis, 86% (Q1:82%, Q3:90%) for the infraspinatus, and 78% (Q1:70%, Q3:81%) for the teres minor muscle, indicating a satisfactory level of accuracy in the model's predictions.

Conclusion: Our computational models demonstrated the capability to delineate RC muscles with a level of precision akin to that of experienced radiologists. As hypothesized, the proposed algorithm exhibited superior performance when segmenting muscles with well-defined boundaries, including the supraspinatus, subscapularis, and infraspinatus muscles.