A novel nonsense variant in NSD1 gene in a female child with Sotos syndrome: A case report and literature review

Brain Behav. 2023 Dec;13(12):e3290. doi: 10.1002/brb3.3290. Epub 2023 Oct 31.

Abstract

Introduction: Sotos syndrome (SS) is an overgrowth disease characterized by distinctive facial features, advanced bone age, macrocephaly, and developmental delay is associated with alterations in the NSD1 gene. Here, we report a case of a 4-year-old female child with SS caused by NSD1 gene nonsense mutation.

Methods: Whole-exome sequencing (WES) was applied for probands and her parents. Sanger sequencing was used to confirm the mutation. We performed the literature review using PubMed and found 12 articles and 14 patients who presented with SS.

Results: The patient showed typical facial features of SS, hand deformities, and seizure. WES revealed de novo heterozygous variant: NSD1 (NM_022455.5), c.6095G > A, p.TRP2032*. We also reviewed the phenotype spectrum of 14 patients with SS, who exhibited a variety of clinical phenotypes, including developmental delay, seizures, scoliosis, hearing loss, cardiac and urinary system abnormalities, and so on.

Discussion: The lack of correlation between mutation sites or types and phenotypes was summarized by literature reviewing. The NSD1 protein contains 14 functional domains and this nonsense mutation was located in SET domain. Early appearance of the termination codon leads to protein truncation. Haploinsufficiency of the NSD1 gene causes the overgrowth disorders.

Keywords: NSD1 gene; Sotos syndrome; nonsense variant.

Publication types

  • Review
  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Child, Preschool
  • Codon, Nonsense
  • Female
  • Histone Methyltransferases / genetics
  • Histone-Lysine N-Methyltransferase / genetics
  • Humans
  • Intracellular Signaling Peptides and Proteins / genetics
  • Mutation
  • Nuclear Proteins / genetics
  • Seizures / etiology
  • Sotos Syndrome* / complications
  • Sotos Syndrome* / genetics

Substances

  • Codon, Nonsense
  • Histone Methyltransferases
  • Histone-Lysine N-Methyltransferase
  • Intracellular Signaling Peptides and Proteins
  • NSD1 protein, human
  • Nuclear Proteins