The complete genome of Escherichia coli JM101 assembled with a combination of Nanopore and Illumina platforms

Adelfo Escalante; Fernando Astudillo; Violeta Larios; Noemí Flores; Guillermo Gosset; Francisco Bolívar

doi:10.1128/MRA.00973-23

The complete genome of Escherichia coli JM101 assembled with a combination of Nanopore and Illumina platforms

Microbiol Resour Announc. 2024 Feb 15;13(2):e0097323. doi: 10.1128/MRA.00973-23. Epub 2024 Jan 16.

Authors

Adelfo Escalante¹, Fernando Astudillo¹, Violeta Larios², Noemí Flores¹, Guillermo Gosset¹, Francisco Bolívar¹

Affiliations

¹ Departamento de Ingeniería Celular y Biocatálisis, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, México.
² Winter Genomics, Salavery, Ciudad de México, México.

Abstract

We report the complete genome and the plasmid (F' episome) sequences of Escherichia coli JM101 assembled with a combination of Nanopore and Illumina data. The resulting genome is a single contig of 4,524,963 bp, and the plasmid consists of a single contig of 197,186 bp.

Keywords: Escherichia coli JM101; F′ episome; Illumina; Nanopore; complete genome.

Grants and funding

IN209421/PAPIIT UNAM