A Biosensor Assay Based on Coiled-Coil-Mediated Human ACE2 Receptor Capture for the Analysis of Its Interactions with the SARS-CoV-2 Receptor Binding Domain

Methods Mol Biol. 2024:2762:89-105. doi: 10.1007/978-1-0716-3666-4_6.

Abstract

Surface plasmon resonance (SPR)-based biosensing enables the characterization of protein-protein interactions. Several SPR-based approaches have been designed to evaluate the binding mechanism between the angiotensin-converting enzyme 2 (ACE2) receptor and the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein leading to a large range of kinetic and thermodynamic constants. This chapter describes a robust SPR assay based on the K5/E5 coiled-coil capture strategy that reduces artifacts. In this method, ACE2 receptors were produced with an E5-tag and immobilized as ligands in the SPR assay. This chapter details methods for high-yield production and purification of the studied proteins, functionalization of the sensor chip, conduction of the SPR assay, and data analysis.

Keywords: Angiotensin-converting enzyme 2 (ACE2) receptor; Kinetic model; Ligand-oriented capture; Receptor-binding domain (RBD); SARS-CoV-2, high yield protein production; SPR data analysis; Surface plasmon resonance (SPR).

MeSH terms

  • Angiotensin-Converting Enzyme 2 / metabolism
  • Biosensing Techniques* / methods
  • COVID-19*
  • Humans
  • Protein Binding
  • SARS-CoV-2 / metabolism
  • Spike Glycoprotein, Coronavirus / metabolism

Substances

  • spike protein, SARS-CoV-2
  • Angiotensin-Converting Enzyme 2
  • Spike Glycoprotein, Coronavirus