Preclinical toxicity analyses of lentiviral vectors expressing the HIV-1 LTR-specific designer-recombinase Brec1

PLoS One. 2024 Mar 8;19(3):e0298542. doi: 10.1371/journal.pone.0298542. eCollection 2024.

Abstract

Drug-based antiretroviral therapies (ART) efficiently suppress HIV replication in humans, but the virus persists as integrated proviral reservoirs in small numbers of cells. Importantly, ART cannot eliminate HIV from an infected individual, since it does not target the integrated provirus. Therefore, genome editing-based strategies that can inactivate or excise HIV genomes would provide the technology for novel curative therapies. In fact, the HIV-1 LTR-specific designer-recombinase Brec1 has been shown to remove integrated proviruses from infected cells and is highly efficacious on clinical HIV-1 isolates in vitro and in vivo, suggesting that Brec1 has the potential for clinical development of advanced HIV-1 eradication strategies in people living with HIV. In line with the preparation of a first-in-human advanced therapy medicinal product gene therapy trial, we here present an extensive preclinical evaluation of Brec1 and lentiviral vectors expressing the Brec1 transgene. This included detailed functional analysis of potential genomic off-target sites, assessing vector safety by investigating vector copy number (VCN) and the risk for potential vector-related insertional mutagenesis, as well as analyzing the potential of Brec1 to trigger an undesired strong T cell immune response. In conclusion, the antiviral designer-recombinase Brec1 is shown to lack any detectable cytopathic, genotoxic or T cell-related immunogenic effects, thereby meeting an important precondition for clinical application of the therapeutic lentiviral vector LV-Brec1 in novel HIV-1 curative strategies.

MeSH terms

  • Genetic Vectors / genetics
  • HIV Infections* / therapy
  • HIV Long Terminal Repeat / genetics
  • HIV-1* / physiology
  • Humans
  • Lentivirus / genetics
  • Lentivirus / metabolism
  • Proviruses / genetics
  • Recombinases / metabolism

Substances

  • Recombinases

Grants and funding

NB and MV are full-time employees of PROVIREX Genome Editing Therapies GmbH since 2022, JC, FB, JH and IH are part-time employees. Furthermore, JH, as full university professor, received additional funding in the form of grants from the Bundesministerium für Bildung und Forschung [GO-Bio FKZ 0315090], the Else Kröner-Fresenius-Stiftung [2010_A82], the ForTra gGMBH of the Else Kröner-Fresenius-Stiftung [2018_T15], and the Free and Hanseatic City of Hamburg [BWFGB project CombatHIV]. JSW received funding in the form of grants from the H.W. & J. Hector Stiftung [project M2101] and the European Union Horizon 2020 program [European HIV Vaccine Alliance 681032]. The funders listed above provided support in the form of consumables and salaries for academic employees, but did not have any additional role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript.