GDP-mannose pyrophosphorylase is an efficient target in Xanthomonas citri for citrus canker control

Microbiol Spectr. 2024 Jun 4;12(6):e0367323. doi: 10.1128/spectrum.03673-23. Epub 2024 May 9.

Abstract

Xanthomonas citri subsp. citri (Xcc) is a bacterium that causes citrus canker, an economically important disease that results in premature fruit drop and reduced yield of fresh fruit. In this study, we demonstrated the involvement of XanB, an enzyme with phosphomannose isomerase (PMI) and guanosine diphosphate-mannose pyrophosphorylase (GMP) activities, in Xcc pathogenicity. Additionally, we found that XanB inhibitors protect the host against Xcc infection. Besides being deficient in motility, biofilm production, and ultraviolet resistance, the xanB deletion mutant was unable to cause disease, whereas xanB complementation restored wild-type phenotypes. XanB homology modeling allowed in silico virtual screening of inhibitors from databases, three of them being suitable in terms of absorption, distribution, metabolism, excretion, and toxicity (ADME/Tox) properties, which inhibited GMP (but not PMI) activity of the Xcc recombinant XanB protein in more than 50%. Inhibitors reduced citrus canker severity up to 95%, similarly to copper-based treatment. xanB is essential for Xcc pathogenicity, and XanB inhibitors can be used for the citrus canker control.

Importance: Xcc causes citrus canker, a threat to citrus production, which has been managed with copper, being required a more sustainable alternative for the disease control. XanB was previously found on the surface of Xcc, interacting with the host and displaying PMI and GMP activities. We demonstrated by xanB deletion and complementation that GMP activity plays a critical role in Xcc pathogenicity, particularly in biofilm formation. XanB homology modeling was performed, and in silico virtual screening led to carbohydrate-derived compounds able to inhibit XanB activity and reduce disease symptoms by 95%. XanB emerges as a promising target for drug design for control of citrus canker and other economically important diseases caused by Xanthomonas sp.

Keywords: GDP-mannose pyrophosphorylase; Xanthomonas; citrus canker; citrus protection; inhibitors; innovation; phosphomannose isomerase.

MeSH terms

  • Bacterial Proteins* / genetics
  • Bacterial Proteins* / metabolism
  • Biofilms / growth & development
  • Citrus* / microbiology
  • Nucleotidyltransferases / genetics
  • Nucleotidyltransferases / metabolism
  • Plant Diseases* / microbiology
  • Virulence
  • Xanthomonas* / enzymology
  • Xanthomonas* / genetics
  • Xanthomonas* / pathogenicity

Substances

  • mannose 1-phosphate guanylyltransferase
  • Bacterial Proteins
  • Nucleotidyltransferases

Supplementary concepts

  • Xanthomonas citri