A genomic dataset integrating genotyping-by-sequencing, SolCAP array and PCR marker data on tetraploid potato advanced breeding lines

Julien Leuenberger; Sanjeev Kumar Sharma; Karen McLean; Roland Pellé; Aurélie Bérard; Marie-Laure Lesage; Danièle Porhel; Marie-Ange Dantec; Jean-Eric Chauvin; Glenn J Bryan; Marie-Laure Pilet-Nayel; Marie-Claire Kerlan; Florence Esnault

doi:10.3389/fpls.2024.1384401

A genomic dataset integrating genotyping-by-sequencing, SolCAP array and PCR marker data on tetraploid potato advanced breeding lines

Front Plant Sci. 2024 May 17:15:1384401. doi: 10.3389/fpls.2024.1384401. eCollection 2024.

Affiliations

¹ Institut de Génétique, Environnement et Protection des Plantes (IGEPP), INRAE, Institut Agro, Univ Rennes, Ploudaniel, France.
² Association des Créateurs de Variétés Nouvelle de Pomme de Terre (ACVNPT), Hanvec, France.
³ Cell & Molecular Science Department, The James Hutton Institute, Dundee, United Kingdom.
⁴ Univ Paris Saclay, INRAE, Evry, France.

No abstract available

Keywords: SolCAP DNA array; analysis pipeline; genomic dataset; genotyping by sequencing; potato; pre-breeding clones.

Grants and funding

The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This work was funded by ACVNPT (Association des Créateurs de Variétés Nouvelles de Pomme de terre), the European project G2PSol (Grant Agreement number: 677379 -G2P-Sol -H2020-SFS-2014-2015/H2020-SFS-2015-2), INRAE Metaprogramme SELGEN and CASDAR project GECONEM (2020 -C2018-07).