A novel series of metazoan L/D peptide isomerases

J Biol Chem. 2024 Jul;300(7):107458. doi: 10.1016/j.jbc.2024.107458. Epub 2024 Jun 8.

Abstract

The function of endogenous cell-cell signaling peptides relies on their interactions with cognate receptors, which in turn are influenced by the peptides' structures, necessitating a comprehensive understanding of the suite of post-translational modifications of the peptide. Herein, we report the initial characterization of putative peptide isomerase enzymes extracted from R. norvegicus, A. californica, and B. taurus tissues. These enzymes are both tissue and substrate-specific across all three organisms. Notably, the lungs of the mammalian species, and the central nervous system of the mollusk displayed the highest isomerase activity among the examined tissues. In vitro enzymatic conversion was observed for several endogenous peptides, such as the tetrapeptide GFFD in A. californica, and mammalian neuropeptide FF in R. norvegicus and B. taurus. To understand their mode of action, we explored the effects of several inhibitors on these enzymes, which suggest common active site residues. While further characterization of these enzymes is required, the investigations emphasize a widespread and overlooked enzyme activity related to the creation of bioactive peptides.

Keywords: analytical chemistry; d-amino acid containing peptide; enzyme; mass spectrometry (MS); neuropeptide; peptide hormone; peptide isomerase.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Isomerases / chemistry
  • Isomerases / metabolism
  • Oligopeptides* / chemistry
  • Oligopeptides* / metabolism
  • Protein Processing, Post-Translational
  • Substrate Specificity

Substances

  • Oligopeptides
  • Isomerases
  • phenylalanyl-leucyl-phenylalanyl-glutaminyl-prolyl-glutaminyl-arginyl-phenylalaninamide