Paenalcaligenes faecalis sp. nov., a novel species of the family Alcaligenaceae isolated from chicken faeces

Int J Syst Evol Microbiol. 2024 Jun;74(6). doi: 10.1099/ijsem.0.006429.

Abstract

A Gram-negative, motile, rod-shaped aerobic and alkalogenic bacterium, designated as strain YLCF04T, was isolated from chicken faeces. Its growth was optimal at 28 °C (range, 10-40 °C), pH 8 (range, pH 6-9) and in 1 % (w/v) NaCl (range, 0-10 %). It was classified to the genus Paenalcaligenes and was most closely related to Paenalcaligenes hominis CCUG 53761AT (97.5 % similarity) based on 16S rRNA gene sequence analysis. Average nucleotide identity and digital DNA-DNA hybridization values between YLCF04T and P. hominis CCUG 53761AT were 76.3 and 18.2 %, respectively. Strain YLCF04T has a genome size of 2.7 Mb with DNA G+C content of 46.3 mol%. Based on its phylogenetic, genomic, phenotypic and biochemical characteristics, strain YLCF04T represents a novel species of the genus Paenalcaligenes, for which the name Paenalcaligenes faecalis sp. nov. is proposed. The type strain is YLCF04T (=CCTCC AB 2022359T= KCTC 92789T).

Keywords: Paenalcaligenes faecalis; antibiotic resistance; chicken feces; health risk.

MeSH terms

  • Alcaligenaceae* / classification
  • Alcaligenaceae* / genetics
  • Alcaligenaceae* / isolation & purification
  • Animals
  • Bacterial Typing Techniques*
  • Base Composition*
  • Chickens* / microbiology
  • DNA, Bacterial* / genetics
  • Fatty Acids
  • Feces* / microbiology
  • Genome, Bacterial
  • Nucleic Acid Hybridization*
  • Phylogeny*
  • RNA, Ribosomal, 16S* / genetics
  • Sequence Analysis, DNA*

Substances

  • RNA, Ribosomal, 16S
  • DNA, Bacterial
  • Fatty Acids