Pengzhenrongella frigida sp. nov., isolated from a glacier

Int J Syst Evol Microbiol. 2024 Jun;74(6):006433. doi: 10.1099/ijsem.0.006433.

Abstract

A Gram-stain-positive, rod-shaped bacterium, designated as HLT2-17T, was isolated from soil sample taken from the Hailuogou glacier in Sichuan province, PR China. Strain HLT2-17T was capable of growing at 4-25°C and in NaCl concentrations ranging from 0 to 2% (w/v). The highest level of 16S rRNA gene sequence similarity was observed with Pengzhenrongella phosphoraccumulans M0-14T (98.3 %) and Pengzhenrongella sicca LRZ-2T (98.2 %). The average nucleotide identity and digital DNA-DNA hybridization values between strain HLT2-17T and its closest relatives, P. phosphoraccumulans M0-14T and P. sicca LRZ-2T, were 80.0-84.0 % and 23.3-27.7 %, respectively. Phylogenomic analysis indicated that strain HLT2-17T clustered together with strains P. phosphoraccumulans M0-14T and P. sicca LRZ-2T. Strain HLT2-17T contained C16 : 0 and anteiso-C15 : 0 as the major fatty acids, and MK-9(H4) as the menaquinone. Therefore, based on a polyphasic approach, we propose that strain HLT2-17T (=CGMCC 1.11116T= NBRC 110443T) represents a novel species of the genus Pengzhenrongella and suggest the name Pengzhenrongella frigida sp. nov.

Keywords: Pengzhenrongella; Pengzhenrongella frigida; cold-adapted; glacier.

MeSH terms

  • Bacterial Typing Techniques*
  • Base Composition*
  • China
  • DNA, Bacterial* / genetics
  • Fatty Acids* / chemistry
  • Ice Cover* / microbiology
  • Nucleic Acid Hybridization*
  • Phylogeny*
  • RNA, Ribosomal, 16S* / genetics
  • Sequence Analysis, DNA*
  • Soil Microbiology*
  • Vitamin K 2* / analogs & derivatives
  • Vitamin K 2* / analysis
  • Vitamin K 2* / chemistry

Substances

  • RNA, Ribosomal, 16S
  • Fatty Acids
  • DNA, Bacterial
  • Vitamin K 2