Broad-spectrum activity against mosquito-borne flaviviruses achieved by a targeted protein degradation mechanism

Nat Commun. 2024 Jun 19;15(1):5179. doi: 10.1038/s41467-024-49161-9.

Abstract

Viral genetic diversity presents significant challenges in developing antivirals with broad-spectrum activity and high barriers to resistance. Here we report development of proteolysis targeting chimeras (PROTACs) targeting the dengue virus envelope (E) protein through coupling of known E fusion inhibitors to ligands of the CRL4CRBN E3 ubiquitin ligase. The resulting small molecules block viral entry through inhibition of E-mediated membrane fusion and interfere with viral particle production by depleting intracellular E in infected Huh 7.5 cells. This activity is retained in the presence of point mutations previously shown to confer partial resistance to the parental inhibitors due to decreased inhibitor-binding. The E PROTACs also exhibit broadened spectrum of activity compared to the parental E inhibitors against a panel of mosquito-borne flaviviruses. These findings encourage further exploration of targeted protein degradation as a differentiated and potentially advantageous modality for development of broad-spectrum direct-acting antivirals.

MeSH terms

  • Animals
  • Antiviral Agents* / pharmacology
  • Cell Line
  • Culicidae / virology
  • Dengue Virus* / drug effects
  • Dengue Virus* / genetics
  • Dengue Virus* / physiology
  • Flavivirus* / drug effects
  • Flavivirus* / genetics
  • Flavivirus* / metabolism
  • Humans
  • Proteolysis* / drug effects
  • Ubiquitin-Protein Ligases / metabolism
  • Viral Envelope Proteins / metabolism
  • Virus Internalization* / drug effects

Substances

  • Antiviral Agents
  • Ubiquitin-Protein Ligases
  • Viral Envelope Proteins