Sequencing-based analysis of microbiomes

Nat Rev Genet. 2024 Dec;25(12):829-845. doi: 10.1038/s41576-024-00746-6. Epub 2024 Jun 25.

Abstract

Microbiomes occupy a range of niches and, in addition to having diverse compositions, they have varied functional roles that have an impact on agriculture, environmental sciences, and human health and disease. The study of microbiomes has been facilitated by recent technological and analytical advances, such as cheaper and higher-throughput DNA and RNA sequencing, improved long-read sequencing and innovative computational analysis methods. These advances are providing a deeper understanding of microbiomes at the genomic, transcriptional and translational level, generating insights into their function and composition at resolutions beyond the species level.

Publication types

  • Review

MeSH terms

  • Animals
  • Computational Biology / methods
  • High-Throughput Nucleotide Sequencing* / methods
  • Humans
  • Microbiota* / genetics
  • Sequence Analysis, DNA / methods