Synthesis, biological evaluation, and molecular modelling of substituted thiazolyl thiourea derivatives: A new class of prolyl oligopeptidase inhibitors

Int J Biol Macromol. 2024 Aug;275(Pt 1):133571. doi: 10.1016/j.ijbiomac.2024.133571. Epub 2024 Jul 1.

Abstract

Prolyl oligopeptidase (POP) is a compelling therapeutic target associated with aging and neurodegenerative disorders due to its pivotal role in neuropeptide processing. Despite initial promise demonstrated by early-stage POP inhibitors, their progress in clinical trials has been halted at Phase I or II. This impediment has prompted the pursuit of novel inhibitors. The current study seeks to contribute to the identification of efficacious POP inhibitors through the design, synthesis, and comprehensive evaluation (both in vitro and in silico) of thiazolyl thiourea derivatives (5a-r). In vitro experimentation exhibited that the compounds displayed significant higher potency as POP inhibitors. Compound 5e demonstrated an IC50 value of 16.47 ± 0.54 μM, representing a remarkable potency. A meticulous examination of the structure-activity relationship indicated that halogen and methoxy substituents were the most efficacious. In silico investigations delved into induced fit docking, pharmacokinetics, and molecular dynamics simulations to elucidate the intricate interactions, orientation, and conformational changes of these compounds within the active site of the enzyme. Moreover, our pharmacokinetic assessments confirmed that the majority of the synthesized compounds possess attributes conducive to potential drug development.

Keywords: Molecular docking; Molecular dynamic simulations; Neurodegenerative disorders; Prolyl oligopeptidase (POP); Thiazolyl thiourea.

MeSH terms

  • Catalytic Domain
  • Chemistry Techniques, Synthetic
  • Humans
  • Models, Molecular
  • Molecular Docking Simulation*
  • Molecular Dynamics Simulation
  • Prolyl Oligopeptidases*
  • Serine Endopeptidases* / chemistry
  • Serine Endopeptidases* / metabolism
  • Serine Proteinase Inhibitors / chemical synthesis
  • Serine Proteinase Inhibitors / chemistry
  • Serine Proteinase Inhibitors / pharmacology
  • Structure-Activity Relationship
  • Thiazoles / chemical synthesis
  • Thiazoles / chemistry
  • Thiazoles / pharmacology
  • Thiourea* / analogs & derivatives
  • Thiourea* / chemical synthesis
  • Thiourea* / chemistry
  • Thiourea* / pharmacology

Substances

  • Prolyl Oligopeptidases
  • Thiourea
  • Serine Endopeptidases
  • Serine Proteinase Inhibitors
  • Thiazoles
  • PREPL protein, human