FOXO-regulated DEAF1 controls muscle regeneration through autophagy

Autophagy. 2024 Dec;20(12):2632-2654. doi: 10.1080/15548627.2024.2374693. Epub 2024 Jul 20.

Abstract

The commonality between various muscle diseases is the loss of muscle mass, function, and regeneration, which severely restricts mobility and impairs the quality of life. With muscle stem cells (MuSCs) playing a key role in facilitating muscle repair, targeting regulators of muscle regeneration has been shown to be a promising therapeutic approach to repair muscles. However, the underlying molecular mechanisms driving muscle regeneration are complex and poorly understood. Here, we identified a new regulator of muscle regeneration, Deaf1 (Deformed epidermal autoregulatory factor-1) - a transcriptional factor downstream of foxo signaling. We showed that Deaf1 is transcriptionally repressed by FOXOs and that DEAF1 targets to Pik3c3 and Atg16l1 promoter regions and suppresses their expression. Deaf1 depletion therefore induces macroautophagy/autophagy, which in turn blocks MuSC survival and differentiation. In contrast, Deaf1 overexpression inactivates autophagy in MuSCs, leading to increased protein aggregation and cell death. The fact that Deaf1 depletion and its overexpression both lead to defects in muscle regeneration highlights the importance of fine tuning DEAF1-regulated autophagy during muscle regeneration. We further showed that Deaf1 expression is altered in aging and cachectic MuSCs. Manipulation of Deaf1 expression can attenuate muscle atrophy and restore muscle regeneration in aged mice or mice with cachectic cancers. Together, our findings unveil an evolutionarily conserved role for DEAF1 in muscle regeneration, providing insights into the development of new therapeutic strategies against muscle atrophy.Abbreviations: DEAF1: Deformed epidermal autoregulatory factor-1; FOXO: Forkhead box O; MuSC: Muscle Stem Cell; PAX7: Paired box 7; PIK3C3: Phosphatidylinositol 3-kinase catalytic subunit type 3.

Keywords: Autophagy; Deaf1; FOXO; cancer cachexia; muscle; sarcopenia.

MeSH terms

  • Animals
  • Autophagy* / genetics
  • Autophagy* / physiology
  • Cell Differentiation
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism
  • Forkhead Transcription Factors / genetics
  • Forkhead Transcription Factors / metabolism
  • Humans
  • Mice
  • Mice, Inbred C57BL
  • Muscle, Skeletal / metabolism
  • Regeneration* / physiology
  • Stem Cells / metabolism
  • Transcription Factors / metabolism

Substances

  • DNA-Binding Proteins
  • Transcription Factors
  • Forkhead Transcription Factors

Grants and funding

This work was supported by Singapore’s Ministry of Education AcRF Award (2022-MOET1-0004, to H.-W.T.; MOE2019-T2-2-006, to N.Y.F; and MOE-T2EP30121-0013, to N.Y.F), National Academy of Medicine grant (MOH-001189-00, to H.-W.T.), Diana Koh Innovative Cancer Research Award (Duke-NUS-DKICRA/2024/0001, to H.-W.T.), National Medical Research Council (NMRC) (MOH-001208-00 to H.-W.T.; MOH-OFIRG20nov-0018 to N.Y.F; MOH-OFYIRG19nov-0022 to H.S.C), National Taiwan University Hospital (112-L2003 to S.-Y.H), the Singapore National Research Foundation (NRF-NRFF12- 2020-0008 to J.N), and National University of Singapore and Yale-NUS College (through Reimagine Research Grant IG20-RRSG-001 to N.H.).