Map-Based Cloning of the Causal Gene for a Seed Dormancy Quantitative Trait Locus in Barley

Methods Mol Biol. 2024:2830:107-120. doi: 10.1007/978-1-0716-3965-8_10.

Abstract

Seed dormancy is an important agronomic trait in cereal crops. Throughout the domestication of cereals, seed dormancy has been reduced to obtain uniform germination. However, grain crops must retain moderate levels of seed dormancy to prevent problems such as preharvest sprouting in wheat (Triticum aestivum) and barley (Hordeum vulgare). To produce modern cultivars with the appropriate seed dormancy levels, it is important to identify the genes responsible for seed dormancy. With recent advances in sequencing technology, several causal genes for seed dormancy quantitative trait loci (QTLs) have been identified in barley and wheat. Here, we present a method to identify causal genes for seed dormancy QTLs in barley, a method that is also applicable to other cereals.

Keywords: Barley; Natural variation; Preharvest sprouting; Quantitative trait locus; Seed dormancy.

MeSH terms

  • Chromosome Mapping* / methods
  • Chromosomes, Plant / genetics
  • Cloning, Molecular* / methods
  • Genes, Plant
  • Hordeum* / genetics
  • Hordeum* / growth & development
  • Plant Dormancy* / genetics
  • Quantitative Trait Loci*
  • Seeds / genetics
  • Seeds / growth & development