Genetic trends in the Kenya Highland Maize Breeding Program between 1999 and 2020

Front Plant Sci. 2024 Jul 1:15:1416538. doi: 10.3389/fpls.2024.1416538. eCollection 2024.

Abstract

Optimization of a breeding program requires assessing and quantifying empirical genetic trends made through past efforts relative to the current breeding strategies, germplasm, technologies, and policy. To establish the genetic trends in the Kenyan Highland Maize Breeding Program (KHMP), a two-decade (1999-2020) historical dataset from the Preliminary Variety Trials (PVT) and Advanced Variety Trials (AVT) was analyzed. A mixed model analysis was used to compute the genetic gains for traits based on the best linear unbiased estimates in the PVT and AVT evaluation stages. A positive significant genetic gain estimate for grain yield of 88 kg ha-1 year-1 (1.94% year-1) and 26 kg ha-1 year-1 (0.42% year-1) was recorded for PVT and AVT, respectively. Root lodging, an important agronomic trait in the Kenya highlands, had a desired genetic gain of -2.65% year-1 for AVT. Results showed improvement in resistance to Turcicum Leaf Blight (TLB) with -1.19% and -0.27% year-1 for the PVT and AVT, respectively. Similarly, a significant genetic trend of -0.81% was noted for resistance to Gray Leaf Spot (GLS) in AVT. These findings highlight the good progress made by KHMP in developing adapted maize hybrids for Kenya's highland agroecology. Nevertheless, the study identified significant opportunities for the KHMP to make even greater genetic gains for key traits with introgression of favorable alleles for various traits, implementing a continuous improvement plan including marker-assisted forward breeding, sparse testing, and genomic selection, and doubled haploid technology for line development.

Keywords: Kenya national breeding program; breeding; genetic gain; highland ecology; maize.

Grants and funding

The author(s) declare financial support was received for the research, authorship, and/or publication of this article. All the field trials reported in this study were primarily supported by funding from the Kenyan Government and the Bill & Melinda Gates Foundation and USAID-funded projects titled Improved Maize for African Soils (IMAS, Grant No. OPPGD1017), and Stress Tolerant Maize for Africa (STMA, Grant No. OPP1134248) projects; the Excellence in Breeding Platform (EiB) and the Bill & Melinda Gates Foundation, USAID, and FFAR provided financial support to conduct this analysis through the project Accelerating Genetic Gains for Maize and Wheat Improvement (BMGF Grant number INV-003439).