A dual-encoder double concatenation Y-shape network for precise volumetric liver and lesion segmentation

Comput Biol Med. 2024 Sep:179:108870. doi: 10.1016/j.compbiomed.2024.108870. Epub 2024 Jul 17.

Abstract

Accurate segmentation of the liver and tumors from CT volumes is crucial for hepatocellular carcinoma diagnosis and pre-operative resection planning. Despite advances in deep learning-based methods for abdominal CT images, fully-automated segmentation remains challenging due to class imbalance and structural variations, often requiring cascaded approaches that incur significant computational costs. In this paper, we present the Dual-Encoder Double Concatenation Network (DEDC-Net) for simultaneous segmentation of the liver and its tumors. DEDC-Net leverages both residual and skip connections to enhance feature reuse and optimize performance in liver and tumor segmentation tasks. Extensive qualitative and quantitative experiments on the LiTS dataset demonstrate that DEDC-Net outperforms existing state-of-the-art liver segmentation methods. An ablation study was conducted to evaluate different encoder backbones - specifically VGG19 and ResNet - and the impact of incorporating an attention mechanism. Our results indicate that DEDC-Net, without any additional attention gates, achieves a superior mean Dice Score (DS) of 0.898 for liver segmentation. Moreover, integrating residual connections into one encoder yielded the highest DS for tumor segmentation tasks. The robustness of our proposed network was further validated on two additional, unseen CT datasets: IDCARDb-01 and COMET. Our model demonstrated superior lesion segmentation capabilities, particularly on IRCADb-01, achieving a DS of 0.629. The code implementation is publicly available at this website.

Keywords: Abdominal CT; CNN; HCC; Liver; Multi-class segmentation.

MeSH terms

  • Carcinoma, Hepatocellular* / diagnostic imaging
  • Deep Learning
  • Humans
  • Image Processing, Computer-Assisted / methods
  • Liver Neoplasms* / diagnostic imaging
  • Liver* / diagnostic imaging
  • Tomography, X-Ray Computed*