Determining genetic diversity of prevalent G and P genotype of Bovine Rotavirus A from neonatal calves of Gujarat, India

J Vet Sci. 2024 Jul;25(4):e55. doi: 10.4142/jvs.24124.

Abstract

Importance: Neonatal calf diarrhea is a major cause of mortality in newborn calves worldwide, posing a significant challenge in bovine herds. Group A Bovine Rotaviruses (BRVA) are the primary contributors to severe gastroenteritis in calves under two months old.

Objectives: This study examined the prevalence and molecular characterization of BRVA in neonatal calves in Gujarat, India.

Methods: Sixty-nine diarrheic fecal samples were collected and subjected to various molecular methods of BRVA detection, isolation, and characterization.

Results: The latex agglutination test (LAT), electropherotyping (RNA-PAGE), and reverse transcription polymerase chain reaction revealed positivity rates of 39.13%, 20.30%, and 37.70%, respectively. RNA-PAGE identified 11 bands with a 4:2:3:2 migration pattern, indicative of the segmented genome of BRVA. BRVA was successfully isolated from LAT-positive samples, with 26 samples exhibiting clear cytopathic effects upon passage in MA-104 cell lines. Genotyping identified G10 as the predominant G genotype, with P[11] genotypes comprising 76.92% of the isolates. The most common G/P combination was G10P[11], highlighting its zoonotic potential.

Conclusions and relevance: These findings underscore the importance of molecular detection and genotyping for effective vaccine development. This study provides crucial insights into the prevalent G and P genotypes of BRVA in Gujarat, India, aiding in the development of targeted control measures.

Keywords: Diarrhea viruses, bovine viral; cell culture; electropherotyping; genotyping techniques; neonatal calves.

MeSH terms

  • Animals
  • Animals, Newborn* / virology
  • Cattle
  • Cattle Diseases* / epidemiology
  • Cattle Diseases* / virology
  • Diarrhea / epidemiology
  • Diarrhea / veterinary
  • Diarrhea / virology
  • Feces / virology
  • Genetic Variation*
  • Genotype*
  • India / epidemiology
  • Prevalence
  • Rotavirus Infections* / epidemiology
  • Rotavirus Infections* / veterinary
  • Rotavirus Infections* / virology
  • Rotavirus* / genetics
  • Rotavirus* / isolation & purification

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