A QTL GN1.1, encoding FT-L1, regulates grain number and yield by modulating polar auxin transport in rice

J Integr Plant Biol. 2024 Oct;66(10):2158-2174. doi: 10.1111/jipb.13749. Epub 2024 Jul 31.

Abstract

Rice grain number is a crucial agronomic trait impacting yield. In this study, we characterized a quantitative trait locus (QTL), GRAIN NUMBER 1.1 (GN1.1), which encodes a Flowering Locus T-like1 (FT-L1) protein and acts as a negative regulator of grain number in rice. The elite allele GN1.1B, derived from the Oryza indica variety, BF3-104, exhibits a 14.6% increase in grain yield compared with the O. japonica variety, Nipponbare, based on plot yield tests. We demonstrated that GN1.1 interacted with and enhanced the stability of ADP-ribosylation factor (Arf)-GTPase-activating protein (Gap), OsZAC. Loss of function of OsZAC results in increased grain number. Based on our data, we propose that GN1.1B facilitates the elevation of auxin content in young rice panicles by affecting polar auxin transport (PAT) through interaction with OsZAC. Our study unveils the pivotal role of the GN1.1 locus in rice panicle development and presents a novel, promising allele for enhancing rice grain yield through genetic improvement.

Keywords: GN1.1; OsZAC; QTL mapping; auxin; grain number.

MeSH terms

  • Biological Transport / genetics
  • Edible Grain / genetics
  • Edible Grain / growth & development
  • Edible Grain / metabolism
  • GTPase-Activating Proteins / genetics
  • GTPase-Activating Proteins / metabolism
  • Gene Expression Regulation, Plant
  • Indoleacetic Acids* / metabolism
  • Oryza* / genetics
  • Oryza* / growth & development
  • Oryza* / metabolism
  • Plant Proteins* / genetics
  • Plant Proteins* / metabolism
  • Quantitative Trait Loci* / genetics

Substances

  • Indoleacetic Acids
  • Plant Proteins
  • GTPase-Activating Proteins